# Copyright 2017-2020 The GPflow Contributors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import Optional, Sequence
import tensorflow as tf
from check_shapes import check_shape as cs
from check_shapes import check_shapes, inherit_check_shapes
from ..base import Parameter, TensorType
from ..utilities import positive
from .base import Combination, Kernel
[docs]
class ChangePoints(Combination):
r"""
The ChangePoints kernel defines a fixed number of change-points along a 1d
input space where different kernels govern different parts of the space.
The kernel is by multiplication and addition of the base kernels with
sigmoid functions (σ). A single change-point kernel is defined as::
K₁(x, x') * (1 - σ(x)) * (1 - σ(x')) + K₂(x, x') * σ(x) * σ(x')
where K₁ is deactivated around the change-point and K₂ is activated. The
single change-point version can be found in :cite:t:`lloyd2014`. Each sigmoid
is a logistic function defined as::
σ(x) = 1 / (1 + exp{-s(x - x₀)})
parameterized by location "x₀" and steepness "s".
The key reference is :cite:t:`lloyd2014`.
"""
@check_shapes(
"locations: [n_change_points]",
"steepness: [broadcast n_change_points]",
)
def __init__(
self,
kernels: Sequence[Kernel],
locations: TensorType,
steepness: TensorType = 1.0,
name: Optional[str] = None,
):
"""
:param kernels: list of kernels defining the different regimes
:param locations: list of change-point locations in the 1d input space
:param steepness: the steepness parameter(s) of the sigmoids, this can be
common between them or decoupled
"""
if len(kernels) != len(locations) + 1:
raise ValueError(
"Number of kernels ({nk}) must be one more than the number of "
"changepoint locations ({nl})".format(nk=len(kernels), nl=len(locations))
)
if isinstance(steepness, Sequence) and len(steepness) != len(locations):
raise ValueError(
"Dimension of steepness ({ns}) does not match number of changepoint "
"locations ({nl})".format(ns=len(steepness), nl=len(locations))
)
super().__init__(kernels, name=name)
self.locations = Parameter(locations)
self.steepness = Parameter(steepness, transform=positive())
def _set_kernels(self, kernels: Sequence[Kernel]) -> None:
# it is not clear how to flatten out nested change-points
self.kernels = list(kernels)
@inherit_check_shapes
def K(self, X: tf.Tensor, X2: Optional[tf.Tensor] = None) -> tf.Tensor:
cs(X, "[batch..., N, 1] # The `ChangePoints` kernel requires a 1D input space.")
rank = tf.rank(X) - 2
batch = tf.shape(X)[:-2]
N = tf.shape(X)[-2]
Ncp = tf.shape(self.locations)[0]
sig_X = cs(self._sigmoids(X), "[batch..., N, 1, Ncp]")
if X2 is None:
rank2 = 0
batch2 = tf.constant([], dtype=tf.int32)
N2 = N
sig_X2 = sig_X
sig_X = cs(
tf.reshape(sig_X, tf.concat([batch, [N, 1, Ncp]], 0)), "[batch..., N, 1, Ncp]"
)
sig_X2 = cs(
tf.reshape(sig_X2, tf.concat([batch, [1, N, Ncp]], 0)), "[batch..., 1, N, Ncp]"
)
else:
rank2 = tf.rank(X2) - 2
batch2 = tf.shape(X2)[:-2]
N2 = tf.shape(X2)[-2]
sig_X2 = cs(self._sigmoids(X2), "[batch2..., N2, 1, Ncp]")
ones = tf.ones((rank,), dtype=tf.int32)
ones2 = tf.ones((rank2,), dtype=tf.int32)
sig_X = cs(
tf.reshape(sig_X, tf.concat([batch, [N], ones2, [1, Ncp]], 0)),
"[batch..., N, ..., 1, Ncp]",
)
sig_X2 = cs(
tf.reshape(sig_X2, tf.concat([ones, [1], batch2, [N2, Ncp]], 0)),
"[..., 1, batch2..., N2, Ncp]",
)
# `starters` are the sigmoids going from 0 -> 1, whilst `stoppers` go
# from 1 -> 0.
starters = cs(sig_X * sig_X2, "[batch..., N, batch2..., N2, Ncp]")
stoppers = cs((1 - sig_X) * (1 - sig_X2), "[batch..., N, batch2..., N2, Ncp]")
# prepend `starters` with ones and append ones to `stoppers` since the
# first kernel has no start and the last kernel has no end
ones = tf.ones(tf.concat([batch, [N], batch2, [N2, 1]], 0), dtype=X.dtype)
starters = cs(tf.concat([ones, starters], axis=-1), "[batch..., N, batch2..., N2, Nkern]")
stoppers = cs(tf.concat([stoppers, ones], axis=-1), "[batch..., N, batch2..., N2, Nkern]")
# now combine with the underlying kernels
kernel_stack = cs(
tf.stack([k(X, X2) for k in self.kernels], axis=-1),
"[batch..., N, batch2..., N2, Nkern]",
)
return tf.reduce_sum(kernel_stack * starters * stoppers, axis=-1)
@inherit_check_shapes
def K_diag(self, X: tf.Tensor) -> tf.Tensor:
cs(X, "[batch..., N, 1] # The `ChangePoints` kernel requires a 1D input space.")
batch = tf.shape(X)[:-2]
N = tf.shape(X)[-2]
Ncp = tf.shape(self.locations)[0]
sig_X = cs(
tf.reshape(self._sigmoids(X), tf.concat([batch, [N, Ncp]], 0)), "[batch..., N, Ncp]"
)
ones = tf.ones(tf.concat([batch, [N, 1]], 0), dtype=X.dtype)
starters = cs(tf.concat([ones, sig_X * sig_X], axis=-1), "[batch..., N, Nkern]")
stoppers = cs(tf.concat([(1 - sig_X) * (1 - sig_X), ones], axis=-1), "[batch..., N, Nkern]")
kernel_stack = cs(
tf.stack([k(X, full_cov=False) for k in self.kernels], axis=-1), "[batch..., N, Nkern]"
)
return tf.reduce_sum(kernel_stack * starters * stoppers, axis=-1)
@check_shapes(
"X: [batch...]",
"return: [batch..., Ncp]",
)
def _sigmoids(self, X: tf.Tensor) -> tf.Tensor:
locations = tf.sort(self.locations) # ensure locations are ordered
locations = tf.reshape(locations, (-1,))
steepness = tf.reshape(self.steepness, (-1,))
return tf.sigmoid(steepness * (X[..., None] - locations))